Document vVQbBOY4xBy1rV5Xk4mBy2B0Z
01-May-2002 07:25pm. F rom-CharI as River Labs Argus Div.
90S SiKthf Drive, Btdg.A Horsham. PA 19044 Tdephone: (2IS) 443-8710 ke/efivc (2IS) 443SS87
A Z .Z 'l G _
22115544443383558877
T-007 P.001
F-437
Io q 6
ARGUS RESEARCH
Charles River Laboratories
Discovery and Development Services
From: Raymond G. York, Ph.D., DABT
To: Company:
Phone: Fax:
John Butenhoff, Ph.D., DABT 3M Corporate Toxicology (651)737-1962 (651)733-1773
Date: 01 May 2002 Total Pages: 22
RE: Protocol 418-020
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Attached is the information on covariant analysis for study 418-020. Four different analyses were done for females and two for males.
Females: 1. Sexual maturation w/ gestational age at sexual maturation as covariate
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2. Sexual maturation w! body weight at maturation as covariate
3. Estrous stages w/ day 64 postweaning body weight as covariate
4. Estrous stages w/ gestational age at start of estrous testing as covariate
Males:
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1. Sexual maturation w/ gestational age at sexual maturation as covariate
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2. Sexual maturation w/ body weight at maturation as covariate
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W e are defining "gestational age" in this context as the time in days from evidence of mating in the P generation until evidence of sexual maturation in the F1 generation. The reasoning is rats naturally delivery after 21 to 23 days of gestation. Pups that are delivered after 23 days of gestatioh tend to weigh more and appear to develop faster than pups of the same sex after 21 days of gestation. Both pups would be 1 day old but the first pup would be 23 gestational days old and the second pup only 21 gestation days old. If a test substance shortened pregnancy (reduced length of gestation or if more pups were delivered early (reduced parturition length) in one group, the pups may reach sexual maturation a day or two before pups in a group which had a longer gestation or parturition length. It would appear that the test substance was causing a delay in sexual maturation, when it actually affected the maternal animal by changing the time spent in utero. By using each pup's age from time of conception to sexual maturation as the covariant, the length of the stay in utero is factored out.
01-May-2002 ;0c:27pm, Fram-Charles Rivar labs Argus Div.
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patency of F1 generation male and female rats, respectively, using gestational age at
sexual maturity and the body weight recorded on the day of preputial separation (male
rats) or day of vaginal patency (female rats) as the covariates.
The Analysis of Covariance was also used to evaluate estrous cycling of F1 generation female rats, using gestational age at the start of estrous testing and day 64 postweaning body weight as the covariates.
Please review the attached information and if you have any questions, please do not hesitate to contact me.
3
Ql-May*2(lQ2 O t: 27pm From-Charlas Rivar Labs Argus DivV
DAY OF MATURITY
10:26 Monday, March 4, 2002
ANCOVA (DUNNETT'S TEST) WITH BODY WEIGHT AS COVARIATE
SEX GROUP
N
MEAN
SD
F 1 60 34.8833 2.07562 2 S8 35.5345 2.26503 3 58 34.0862 2.56347 4 58 34.8103 2.11475 5 54 36.7222 2.43726 *
M 1 52 48.4615 2.13708 2 58 49.4655 2.68991 3 57 49.3333 3.42956 4 58 49.7241 3.10513 5 54 52.3333 3.02817 *
* Significantly different from Control group 1 (p<0.05)
1
ANCOVA (DUNNETT'S TEST) WITH GESTATION AGE AS COVARIATE (#)
SEX GROUP
N
MEAN
SD
F 1 60 34.8833 2.07562 2 58 35.5345 2.26503 3 58 34.0862 2.56347 4 54 34.9630 2.08284 5 52 36.7115 2.47605
M 1 52 48.4615 2.13708 2 58 49.4655 2.68991 3 57 49.3333 3.42956 4 54 49.8333 3.19049 5 53 52.2642 3.01376
(#) No statistically significant differences when compared with control group 1 (p>0.05)
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T)1-May-ifl02 02:27pm From-Charlss River Labs Argus 0 iv.-
E5TR0US stages
10:26 Monday, March 4, 2002 2
ANCOVA (DUNNETT'S TEST) WITH DAY 64 BODY WEIGHT AS COVARIATE
SEX GROUP
N
MEAN
SD
F 1 30 4.66667 0.88409 2 29 5.03448 0.90565 3 30 5.03333 0.80872 4 30 5.03333 1.06620 5 30 5.40000 0.67466 *(1)
ANCOVA (DUNNETT'S TEST) WITH ESTROUS AGE AS COVARIATE
SEX GROUP
N
MEAN
SD
F 1 30 4.66667 0.88409 2 29 5.03448 0.90565 3 30 . 5.03333 0.80872 4 28 5.03571 1.10494 5 28 5.39286 0.68526 *(1)
* significantly different from Control group 1 (p<0.05)
(1) Note: Results from Dunnett's test are reported without regard to the significance of the global treatment group effect in the overall a n c o v a (Haseman, Toxicological sciences, June, 2001). In both analyses (covariate = day 64 body weight and covariate = estrous age) the global treatment group effect was not statistically significant in the overall a n c o v a .
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i
*01-May-41102 02:28pm From-Char 1es Rivar Labs Argus D i w
DAY OF MATURITY
10:26 Monday, March 4, 2002 5
ANCOVA WITH BODY WEIGHT AS COVARIATE
The Mixed Procedure
Model information
Data set Dependent Variable Covariance Structure Estimation Method Residual Variance Method Fixed Effects SE Method Degrees of Freedom Method
WORK.AAA DAY_MAT Diagonal REML
Profile Model-Based Residual
class GROUP
class Level information Levels values
5 12345
Dimensions
Covariance parameters Columns in X Columns in Z Subjects Max Obs Per Subject Observations Used Observations Not Used Total Observations
1 7 0 1
300
288 12
300
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QI-May->W02 _ 02:28pm From-Charles River Labs Argus D iv v
Effect GROUP GROUP GROUP
DAY OF MATURITY
10:26 Monday, March 4, 2002 6
ANCOVA WITH BODY WEIGHT AS COVARIATE
---SEX=F------------------------------------------------
The Mixed Procedure
covariance Parameter Estimates
Cov Parm Estimate
Residual
4.3642
Fit Statistics
-2 Res Log Likelihood AIC (smaller is better) AICC (smaller is better)
Bic (smaller is better)
1246.4 1248.4 1248.4 1252.0
-Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F Value Pr > F
BWT GROUP
1 282 4 282
59.63 9.50
<.0001 <.0001
Least Squares Means
GROUP
Estimate
Standard Error
DF t Value Pr > 1t|
1
34.8248
0.2698 282 129.07
<.0001
2
35.7142
0.2753 282 129.73
<.0001
3
34.1967
0.2747 282 124.50
<.0001
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01-May-2002 02:28pm From-CharI as River Labs Argus 0 iv :'
Effect GROUP GROUP GROUP GROUP
DAY o f MATURITY
10:26 Monday, March 4, 2002 7
ANCOVA WITH BODY WEIGHT AS COVARIATE
-- ------------- s EX=F------------------------------------------------- ---
The Mixed Procedure
Least Squares Means
Effect
GROUP
Estimate
standard Error
DF t value Pr > It |
GROUP GROUP
4 5
34.8710 36.4103
0.2744 282 127.07 0.2871 282 126.80
Differences of Least Squares Means
<.0001 <.0001
standard
GROUP _GROUP Estimate
Error
OF t Value Pr > |t | Adjustment
Adj P
21 31 41 51
0.8893 -0.6281
0.04619 1.5855
0.3859 0.3853
0.3850 0.3932
282 282
282 28 2
2.30 -1.63
0.12
4.03
0.0219 0.1042 0.9046 <.0001
Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu
0.0736 0.3006
0.9999 0.0003
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'Q1-May^?0Q2 02 :28pm From-Charlas Rivsr Labs Argus Div.
DAY OF m a t u r i t y
10:26 Monday, March 4, 2002 8
ANCOVA WITH BODY WEIGHT AS COVARIATE
The Mixed Procedure
Model information
Data set
Dependent Variable
Covariance Structure Estimation Method Residual variance Method Fixed Effects SE Method Degrees of Freedom Method
WORK.AAA
DAY_MAT Diagonal REML
Profile Model-Based Resi dual
class Levet Information
Class Levels Values
GROUP
5 12345
Dimensions
Covariance Parameters Columns in X
Columns in z Subjects Max obs Per Subject Observations used
Observations Not used Total Observations
1 7 0 1 300 279 21 300
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[
Ul-May-2l)02 02:28pm From-Charlas River Labs Argus Div.-
DAY OF MATURITY
10:26 Monday, March 4, 2002 9
ANCOVA WITH BODY WEIGHT AS COVARIATE
Effect
GROUP GROUP GROUP
The Mixed Procedure
Covariance Parameter Estimates
Cov Parm
Estimate
Residual
7.1683
Fit Statistics
-2 Res Log Likelihood AIC (smaller is better) AICC (smaller is better) BIC (smaller is better)
1344.4 1346.4
1346.4 1350.0
Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F value Pr > F
BWT GROUP
1 273 4 273
53.38 17.77
<.0001 <.0001
Least Squares Means
GROUP
Estimate
standard Error
DF t Value . Pr > i11
1
48.5554
0.3715 273 130.70
<.0001
2
49.6708
0.3527 273 140.84
<.0001
3
49.0207
0.3572 273 137.24
<.0001
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5l-May-2002 02:28pm From-CharI as River Labs Argus Div.
Effect
GROUP GROUP GROUP GROUP
DAY OF MATURITY
10:26 Monday, March 4, 2002 10
ANCOVA WITH BODY WEIGHT AS COVARIATE
SEX--M
The Mixed Procedure
Least squares Means
Effect
GROUP
Estimate
Standard Error
OF t value Pr > !t 1
GROUP GROUP
4 5
49.5845 52.5024
0.3521 273 140.84 0.3651 273 143.81
<.0001 <.0001
Differences of Least Squares Means
Standard
GROUP _GROUP Estimate
Error
OF t Value Pr > 1t 1 Adjustment
Adj P
21 31 41 51
1.1154 0.4653 1.0291
3.9469
0.5115 0.5164 O.S123
0.5203
273
273
273 273
2.18 0.90 2.01
7.59
0.0301 0.3684
0.0456 <.0001
Dunnett-Hsu Dunnett-hsu
Dunnett-Hsu Dunnett-Hsu
0.0964 0.7726
0.1409 <.0001
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II
0l-MayZ0Q2 02:28pm From-Charles River Labs
d a y OF m a t u r i t y
10:26 Monday, March 4, 2002
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
______ SEX=F ------
11
The Mixed Procedure
Model information
Data Set
Dependent variable covariance structure Estimation Method Residual Variance Method Fixed Effects s e Method Degrees of Freedom Method
WORK.AAA DAY_MAT Diagonal REML Profile Model-Based Residual
Class Level information
class Levels values
GROUP
5 12345 Dimensions
Covariance Parameters Columns in x Columns in z
subjects
Max obs Per subject Observations used Observations Not Used
Total Observations
1 7 0
1
300 282
18
300
Div.-
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JoZ
HI-May-ZUOZ 02:29pm F rom-CharI as River Labs Argus D iv .-
Effect
GROUP GROUP GROUP
DAY OF MATURITY
10:26 Monday, March 4, 2002 12
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
SEX=F
The Mixed Procedure
covariance Parameter Estimates
cov Parm
Estimate
Residual
0.2779
Fit Statistics
-2 Res Log Likelihood
AIC (smaller is better) AICC (smaller is better)
Bic (smaller is better)
457.3 459.3 459.3 462.9
- Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F value Pr > F
GEST_AGE GROUP
1 276 4990.64 <.0001
4 276
3.21 0.0135
Least Squares Means
GROUP
Estimate
standard Error
DF t Value Pr > |t|
1
35.1763 0.06819 276 515.88
<.0001
2
35.3426 0.06928 276 510.16
<.0001
3
35.0133 0.07046 276 496.94
<.0001
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1-May-2002 02r29pm F rom-Charies River Labs Argus Div...
Effect GROUP GROUP GROUP GROUP
DAY OF MATURITY
10:26 Monday, March 4, 2002 13
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
SEX=F
The Mixed Procedure
Least Squares Means
Effect
GROUP
Estimate
Standard Error
DF t value pr > |t|
GROUP GROUP
4 5
35.2004 0.07182 276 490.11 35.3069 0.07576 276 466.01
<.0001 <.0001
Differences of Least Squares Means
standard
GROUP _GROUP Estimate
Error
DF t Value Pr > |t[ Adjustment
Adj P
21
31 41 51
0.1663 -0.1630 0.02402
0.1306
0.09732 0.09749 0.09889
0.1027
276 276 276 276
1.71
-1.67 0.24 1.27
0.0887 0.0956
0.8083 0.2048
Dunnett-Hsu Dunnett-Hsu
Dunnett-Hsu Dunnett-Hsu
0.2639 0.2816
0.9978 0.5273
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0l-May-2002 32:29pm From-Charles River Labs
DAY OF MATURITY
10:26 Monday, March 4, 2002 14
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
--- ------------ S E X = M -------------------------------------- ----------
The Mixed Procedure
Model Information
Data Set Dependent Variable Covariance Structure Estimation Method Residual Variance Method Fixed Effects SE Method Degrees of Freedom Method
WORK.AAA DAY_MAT Diagonal REML Profile Model-Based Residual
Class Level information
Class Levels values
GROUP
5 12345
Dimensions
Covariance Parameters columns in x columns in Z
Subjects Max Obs Per Subject Observations used
Observations Not Used Total observations
1 7 0
1 300 274
26 300
Div.-
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ir
D!-May-?1)02 02:29pm From-Charles River Labs Argus Div.-.
Effect
GROUP GROUP GROUP
DAY OF MATURITY
10:26 Monday, March 4, 2002 15
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
------- SEX=M--------
The Mixed Procedure
Covariance Parameter Estimates
Cov Parm
Estimate
Residual
0.3806
Fit Statistics
-2 Res Log Likelihood AIC (smaller is better)
Aicc (smaller is better) BIC (smaller is better)
529.4 531.4
531.4 535.0
- Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F Value Pr > F
GEST_AGE GROUP
1 268 5816.42 <.0001
4 268
1.80 0.1290
Least Squares Means
GROUP
Estimate
Standard Error
DF t Value Pr > |t|
1
49.7916 0.08731 268 570.26
<.0001
2
49.9788 0.08129 268 614.84
<.0001
3
49.7086 0.08186 268 607.21
<.0001
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01-May-2002 02:29pm F rom-CharI as Rivsr Labs Argus 0 iv . -
Effect
GROUP GROUP
OAY OF MATURITY
10:26 Monday, March 4, 2002 16
ANCOVA WITH GESTATIONAL AGE AS COVARIATE
------ SEX=M------
The Mixed Procedure
Least Squares Means
GROUP
Estimate
standard Error
DF t Value Pr > |t|
4
49.8734 0.08396 268 594.04
<.0001
5
49.9531 0.09000 268 555.05
<.0001
Effect GROUP GROUP GROUP GROUP
GROUP
2 3 4 5
_GROUP
1 1 1 1
Differences of Least Squares Means
Standard
Estimate
Error
DF t Value Pr > 111
0.1872
-0.08298 0.08185 0.1615
0.1183 0.1190 0.1211 0.1295
268 268 268 268
1.58 -0.70
0.68 1.25
0.1147
0.4861 0.4995 0.2135
Adjustment
Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu
Adj p
0.3183 0.8903 0.9003 0.5288
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01-May-2002 02:29pm F rom-CharI es River Labs Argus D iv . -
f e m a l e s - ESTROUS STAGES
10:26 Monday, March 4, 2002 17
ANCOVA WITH ESTROUS AGE AS COVARIATE
The Mixed procedure
Model information
Data Set Dependent Variable covariance structure Estimation Method Residual Variance Method Fixed Effects SE Method Degrees of Freedom Method
WORK.AAA
EST Diagonal REML Profile Model-Based Residual
Class GROUP
class Level information Levels Values
5 12345
Di tensions
Covariance Parameters columns in X Columns in z Subjects Max Obs Per subject Observations Used Observations Not Used Total Observations
1 7
0 1
300 145
155 300
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3 1-May-2'002 02:29pm From-Char Ias River Labs Argus Div
Effect
GROUP GROUP GROUP
FEMALES - ESTROUS STAGES
10:26 Monday, March 4, 2002 18
ANCOVA WITH ESTROUS AGE AS COVARIATE
--------------- SEX=F--------- ----------------
The Mixed Procedure
covariance Parameter Estimates
cov Parm
Estimate
Residual
0.7707
Fit Statistics
-2 Res Log Likelihood Aic (smaller is better) AICC (smaller is better)
BIC (smaller is better)
381.0 383.0 383.0
385.9
. Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F value Pr > F
EST_AGE GROUP
1 139 4 139
4.04 1.90
0.0462 0.1131
Least Squares Means
GROUP
Estimate
Standard Error
OF t value Pr > |t|
1
4.7408
0.1645
139
28.83
<0001
2
4.9751
0.1657
139
30.03
<.0001
3
5.0098
0.1607
139
31.17
<.0001
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>1
01-May-2002 02:30pm From-Charles River Labs Argus Div.--
FEMALES - ESTROUS STAGES
10:26 Monday, March 4, 2002 19
ANCOVA WITH ESTROUS AGE AS COVARIATE
Effect
GROUP GROUP
GROUP
4 5
The Mixed Procedure
Least Squares Means
Estimate
Standard Error
DF
5.0590 5.3769
0.1663 0.1661
139 139
t value
30.42 32.37
Pr > |t|
<.0001 <.0001
Effect GROUP GROUP GROUP GROUP
GROUP
2 3 4 5
_GROUP
1 1 1 1
Differences of Least Squares Means
Standard
Estimate
Error
DF t Value Pr > |t|
0.2343
0.2690
0.3182 0.6361
0.2381 0.2318 0.2321 0.2350
139 139 139 139
0.98
1.16 1.37 2.71
0.3266
0.2479 0.1725 0.0076
Adj ustment Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu Dunnett-Hsu
Adj P
0.7202 0.5956 0.4501 0.0267
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o iO
Q1-May-2002 02 :30pm F rom-CharI es R i var Labs Argus D i v - -
FEMALES - ESTROUS STAGES
10:26 Monday, March 4, 2002 20
ANCOVA WITH DAY 64 BODY WEIGHT AS COVARIATE
------ SEX=F ------
The Mixed Procedure
Model information
Data Set
Dependent Variable Covariance Structure Estimation Method Residual Variance Method Fixed Effects SE Method Degrees of Freedom Method
WORK.AAA EST Diagonal REML
Profile
Model-Based Residual
Class GROUP
class Level Information Levels values
5 12345
Di mensions
Covariance Parameters Columns in X Columns in Z subjects Max obs Per subject observations used Observations Not Used Total observations
1
7 0 1 300 149 151 300
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JLl
3!-May-iOQ2 02:30pm . From-Charles River Labs Argus 0 i v
Effect GROUP GROUP GROUP
FEMALES - ESTROUS STAGES
10:26 Monday, March 4, 2002 21
ANCOVA WITH DAY 64 BODY WEIGHT AS COVARIATE
-- -------------- SEX=F--------------------------------------------
The Mixed Procedure
Covariance Parameter Estimates
cov parm
Estimate
Residual
0.7394
Fit statistics
-2 Res Log Likelihood
AIC (smaller is better) AICC (smaller is better)
Bic (smaller is better)
390.6 392.6 392.6 395.6
- Type 3 Tests of Fixed Effects
Effect
Num Den DF DF F Value Pr > F
BWT_64 GROUP
1 143 4 143
6.80 2.11
0.0101 0.0829
Least squares Means
GROUP
Estimate
Standard Error
DF t value Pr > |tj
1
4.6807
0.1571
143
29.80
<.0001
2
5.0123
0.1599
143
31.35
<.0001
3
5.1143
0.1600
143
31.96
<.0001
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J L iL
wHWajr?tl02 02:30pm From-Char Ias R ivar Labs Argus Div...
Effect
GROUP GROUP GROUP GROUP
FEMALES - ESTROUS STAGES
10:26 Monday, March 4, 2002 22
ANCOVA WITH DAY 64 BODY WEIGHT AS COVARTATE
------ --------- S E X = F -----------------------------------------------
The Mixed procedure
Least Squares Means
Effect
GROUP
Estimate
standard Error
DF t value Pr > jt|
GROUP GROUP
4 5
5.045S 5.3143
0.1571 0.1604
143 143
32.12 33.13
<.0001 <.0001
Differences of Least Squares Means
Standard
GROUP _GROUP Estimate
Error
DF t value Pr > it| Adjustment
Adj P
21 31 41 51
0.3316 0.4337 0.3648 0.6336
0.2244
0.2235 0.2220 0.2253
143
143 143 143
1.48 1.94 1.64
2.81
0.1416 0.0543
0.1025 0.0056
Dunnett-Hsu Dunnett-Hsu
Dunnett-Hsu Dunnett-Hsu
0.3873 0.1682 0.2948 0.0201
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-3